Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGCCCAGCTGCAT
.((((((((.(((((...(((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281956
GeneSymbolCSMD2
Binding site9919,9936
Score1.0
Seed1
Au0.368
Energy-23.3
Binding len17
Me-5.269
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure