Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGAAGCCGCCAAGAGCTGCGGG
((((((((((((((..((((.&))))...))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281987
GeneSymbolSPOCD1
Binding site2514,2540
Score0.846
Seed1
Au0.426
Energy-23.3
Binding len26
Me-4.906
Phylopstem-0.24040356777777783
Phylopflank-0.11594360975000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure