Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGAAGCCGCCAAGAGCTGCGGG
((((((((((((((..((((.&))))...))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281988
GeneSymbolSPOCD1
Binding site1092,1118
Score0.923
Seed1
Au0.426
Energy-23.3
Binding len26
Me-4.906
Phylopstem1.781437388888889
Phylopflank1.66107698375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure