Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGCGATTCTGGCGGCTGCT
..((((((((((((((..(((&)))..))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282063
GeneSymbolDOC2A
Binding site11,34
Score0.949
Seed1
Au0.333
Energy-21.2
Binding len23
Me-4.957
Phylopstem1.2422443529411762
Phylopflank1.3378708474999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure