Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCAGCAACAGATGCGACTGCAGCAACTGCAGA
(((((((((((((((((....&.))))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282098
GeneSymbolYAP1
Binding site1189,1225
Score0.904
Seed1
Au0.426
Energy-23.9
Binding len22
Me-3.938
Phylopstem4.066891985
Phylopflank4.2181319437500004
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure