Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGAGAGGCTGCTGCCCAGAAACTGCTGGGTTG
.(((((.((((((((.(((((&))))).))))))))...............))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001282129
GeneSymbolSSH2
Binding site5318,5353
Score1.0
Seed0
Au0.382
Energy-27.4
Binding len35
Me-5.57
Phylopstem1.2344272
Phylopflank1.8777467999999997
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end7
Position3UTR
2D Structure