Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCATCCAGCCGCAGCC
.....((((((((((.(((((&)))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282129
GeneSymbolSSH2
Binding site5069,5089
Score1.0
Seed0
Au0.426
Energy-22.6
Binding len20
Me-13.899
Phylopstem2.2950353900000002
Phylopflank1.7932951199999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure