Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGGTGGGTGTGGCTGCAGG
(((((((((((.(((..(((.&)))..))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282147
GeneSymbolSOHLH2
Binding site1261,1282
Score0.846
Seed1
Au0.456
Energy-18.2
Binding len21
Me-7.517
Phylopstem0.5522124545454546
Phylopflank1.0262909175000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure