Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCACACGAGCTGCGGCTGCC
..((((((((((((((..((.&))..)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282149
GeneSymbolABR
Binding site3534,3554
Score0.846
Seed1
Au0.353
Energy-23.6
Binding len20
Me-4.957
Phylopstem5.155995246666667
Phylopflank4.232155831250001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure