Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGGTTGCTAGGG
.(((((((..(...(((((...&))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282166
GeneSymbolSUV39H1
Binding site2311,2327
Score0.846
Seed1
Au0.368
Energy-17.4
Binding len16
Me-11.585
Phylopstem0.007306727142857136
Phylopflank0.291669258125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure