Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGTCAACCACAGTTGTGAC
(((((((((.(((((((((((&)))))).))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282166
GeneSymbolSUV39H1
Binding site1257,1280
Score0.962
Seed1
Au0.515
Energy-22.7
Binding len23
Me-5.18
Phylopstem5.023313775
Phylopflank4.695105066249999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure