Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGCCCGCCTCAGGTCAGGGCCCAGCGTGTGATGTAGGGG
...((((((((((.(((((((&))))))))))............................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001282176
GeneSymbolCLPTM1
Binding site2164,2210
Score0.846
Seed0
Au0.309
Energy-26.9
Binding len46
Me-7.371
Phylopstem0.39000967631578953
Phylopflank0.7343813212500001
Longest consecutive pairings10
Position of longest consecutive pairings36
Pairings in 3prime end7
Position3UTR
2D Structure