Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGTGCTGCTCCTGCAAA
((((((..(((((...(((((&)))))...)))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363885
GeneSymbolPCBP4
Binding site544,566
Score0.846
Seed0
Au0.5
Energy-21.7
Binding len22
Me-9.62
Phylopstem0.438
Phylopflank-0.16977499999999998
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure