Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACCTAATGCAGTTGCAT
.((((((((((...(((((..&)))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282181
GeneSymbolPPP2R5E
Binding site2821,2841
Score0.923
Seed1
Au0.676
Energy-21.3
Binding len20
Me-9.286
Phylopstem2.1373948
Phylopflank1.192591025
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure