Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTACTTTGTGTGTG
.....((((((((.((((((((&)))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282186
GeneSymbolCYSLTR1
Binding site537,555
Score0.923
Seed0
Au0.574
Energy-18.1
Binding len18
Me-14.522
Phylopstem-0.12806800000000002
Phylopflank0.17047157812499997
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure