Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGTGGAGCTGCGGCGGCTGCAC
.(((((((((.((.((.....&.)).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282206
GeneSymbolSIGMAR1
Binding site273,297
Score1.0
Seed1
Au0.309
Energy-21.9
Binding len17
Me-7.475
Phylopstem0.42527403333333336
Phylopflank0.2431644129999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure