Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGTGGAGCTGCGGCGGCTGCAC
.(((((((((.((.((.....&.)).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282207
GeneSymbolSIGMAR1
Binding site213,237
Score0.923
Seed1
Au0.309
Energy-21.9
Binding len17
Me-7.475
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure