Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGAACTACCCTGTAGCCAGGA
.((((((.((((..((((.(((&))).))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282282
GeneSymbolJAKMIP2
Binding site2727,2748
Score0.846
Seed1
Au0.603
Energy-19.0
Binding len21
Me-8.253
Phylopstem0.29959066666666667
Phylopflank0.01153607525000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure