Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGAAGCCTGCAGGACTGCT
..((((((((((((.((((((&)))))).)))).))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363889
GeneSymbolTOPBP1
Binding site4162,4185
Score0.923
Seed1
Au0.471
Energy-21.6
Binding len23
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure