Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGTGGCAGCTGGGAA
((.(((((((.((((..((((&)))))))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363889
GeneSymbolTOPBP1
Binding site4122,4142
Score1.0
Seed0
Au0.485
Energy-21.0
Binding len20
Me-8.553
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure