Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAACACTGCAGCAGTCCTGATTTGCGAA
((((((((((((.(((..((.&))..))))))))))..........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282282
GeneSymbolJAKMIP2
Binding site961,991
Score0.846
Seed1
Au0.588
Energy-19.1
Binding len30
Me-5.227
Phylopstem0.14874133636363637
Phylopflank0.69303168
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure