Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTAGATTGTAGCACCCGGGTC
((((((..((((((.(((....&))).))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001363891
GeneSymbolFTO
Binding site1870,1891
Score0.846
Seed0
Au0.456
Energy-17.7
Binding len21
Me-8.53
Phylopstem1.1884501666666667
Phylopflank1.1783255435714286
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end3
Position3UTR
2D Structure