Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAACCTCTACTGCC
..((((..(.((((((.(((.&))))))))).)..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282309
GeneSymbolCATSPER2
Binding site2384,2402
Score0.923
Seed0
Au0.544
Energy-18.2
Binding len18
Me-10.057
Phylopstem0.8689988333333334
Phylopflank0.7725748899999998
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure