Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCACGACCCAGTTTCCAGCAT
.((((((((.((((((..(((&)))..)))))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282322
GeneSymbolRNF212B
Binding site604,628
Score0.897
Seed1
Au0.441
Energy-17.9
Binding len24
Me-5.036
Phylopstem1.4018874166666668
Phylopflank2.01650426375
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure