Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGCTGCT
..(((((((((.(.(...(((&.)))...).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282326
GeneSymbolSMG6
Binding site2083,2127
Score0.923
Seed1
Au0.368
Energy-22.0
Binding len21
Me-9.394
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure