Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTTGCATATCAGCCAGCAGTTGTC
..(((((((((((((.(((((&)))))........))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282326
GeneSymbolSMG6
Binding site218,246
Score1.0
Seed1
Au0.574
Energy-20.5
Binding len28
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure