Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGCTCCCAGGTGCAT
.((((.(((.((..(((.(((&))).))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282337
GeneSymbolPLS3
Binding site2156,2175
Score0.846
Seed0
Au0.544
Energy-18.4
Binding len19
Me-9.083
Phylopstem3.8769400000000003
Phylopflank2.3550305675
Longest consecutive pairings5
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure