Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTAAACTGCAGCTTGCAGC
((((((((((((((.(((.((&)).))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282342
GeneSymbolARMC8
Binding site1685,1707
Score0.833
Seed1
Au0.603
Energy-20.9
Binding len22
Me-4.673
Phylopstem5.268206287333333
Phylopflank5.917206099375
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure