Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCACATTTCAGCTGCAT
.((((((((.(((((((((..&)))))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282353
GeneSymbolITGB6
Binding site3483,3503
Score0.923
Seed1
Au0.632
Energy-21.2
Binding len20
Me-5.036
Phylopstem4.7437395
Phylopflank4.59121486
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure