Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGAATGCAACTGCGACTGTCAGA
((((((.((((((((((....&.)))))))))).))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282353
GeneSymbolITGB6
Binding site1447,1474
Score0.923
Seed0
Au0.559
Energy-18.8
Binding len20
Me-5.481
Phylopstem1.0303213000000002
Phylopflank0.32440200062499996
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure