Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGAATGCAACTGCGACTGTCAGA
((((((.((((((((((....&.)))))))))).))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282354
GeneSymbolITGB6
Binding site1269,1296
Score0.923
Seed0
Au0.559
Energy-18.8
Binding len20
Me-5.481
Phylopstem0.39838830999999997
Phylopflank0.20568264000000003
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure