Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGTCAGCCCAGAATGCAAC
(((((.(((.(((((..((((&))))..))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282355
GeneSymbolITGB6
Binding site1546,1568
Score0.846
Seed0
Au0.5
Energy-19.0
Binding len22
Me-7.314
Phylopstem0.7772215999999998
Phylopflank0.34738970625
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure