Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGCCACTGGTGCTGCCCTGTACCCACAACGTGTGCCAGGC
.((((((((((..(((......&.)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282379
GeneSymbolTRIM46
Binding site240,282
Score0.923
Seed1
Au0.324
Energy-20.1
Binding len17
Me-8.429
Phylopstem2.8542178999999996
Phylopflank3.6529395987499997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure