Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCAGCCGGGAT
((.(.(((((((((((.....&))))))))))).).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282379
GeneSymbolTRIM46
Binding site67,84
Score0.846
Seed0
Au0.265
Energy-22.8
Binding len17
Me-9.614
Phylopstem2.6766581818181816
Phylopflank1.7643334075
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure