Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCTGCAGTTGCC
..(((((((((((.((.....&)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282380
GeneSymbolARPIN
Binding site3318,3333
Score1.0
Seed1
Au0.412
Energy-20.2
Binding len15
Me-5.814
Phylopstem-0.12341688181818183
Phylopflank0.08300765999999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure