Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTACAACTGCGCTGA
...((((.(((((((((((..&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282380
GeneSymbolARPIN
Binding site449,465
Score1.0
Seed0
Au0.559
Energy-20.8
Binding len16
Me-8.828
Phylopstem0.7150525454545454
Phylopflank0.5034272250000003
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure