Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAAACCGCGCGCTGCT
..((((((((((((....(((&)))...))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282382
GeneSymbolPTTG1
Binding site175,195
Score0.846
Seed1
Au0.382
Energy-22.9
Binding len20
Me-5.925
Phylopstem-0.3899852969230769
Phylopflank-0.33367122475
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end4
Position5UTR
2D Structure