Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCACATTTCAGCTGCAT
.((((((((.(((((((((..&)))))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282388
GeneSymbolITGB6
Binding site3510,3530
Score0.846
Seed1
Au0.632
Energy-21.2
Binding len20
Me-5.036
Phylopstem3.4963402
Phylopflank4.507677738749999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure