Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAACTGGAGTTT
....((((.(((((((((((.&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282391
GeneSymbolEPC1
Binding site3437,3454
Score0.846
Seed0
Au0.647
Energy-21.7
Binding len17
Me-10.603
Phylopstem7.952231818181819
Phylopflank5.989400915000001
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure