Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGAAAAAGGCAGTGGTCAGCAGCCAGTCAGTCTGCAGG
((((((((((((((((.....&.)))))).).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282391
GeneSymbolEPC1
Binding site559,601
Score0.962
Seed1
Au0.544
Energy-20.0
Binding len21
Me-3.938
Phylopstem1.9720936526315789
Phylopflank3.841604325000001
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end3
PositionCDS
2D Structure