Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTAAAAATGTGCCAGGC
.(((((((((.....(((....&)))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282396
GeneSymbolHPCAL4
Binding site2103,2120
Score0.846
Seed1
Au0.603
Energy-16.6
Binding len17
Me-12.846
Phylopstem0.23306155555555558
Phylopflank-0.06983950374999989
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure