Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATACAGCTGCATGCTT
....(((((((((((((.(((&))).)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282396
GeneSymbolHPCAL4
Binding site2238,2257
Score0.923
Seed0
Au0.588
Energy-19.7
Binding len19
Me-9.547
Phylopstem0.2876626428571428
Phylopflank0.35116276187499995
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure