Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTAAAAATGTGCCAGGC
.(((((((((.....(((....&)))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282397
GeneSymbolHPCAL4
Binding site1781,1798
Score0.846
Seed1
Au0.603
Energy-16.6
Binding len17
Me-12.846
Phylopstem0.5805237333333333
Phylopflank0.31714735124999993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure