Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATACAGCTGCATGCTT
....(((((((((((((.(((&))).)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282397
GeneSymbolHPCAL4
Binding site1916,1935
Score0.923
Seed0
Au0.588
Energy-19.7
Binding len19
Me-9.547
Phylopstem-0.033989142857142815
Phylopflank0.28274841374999987
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure