Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGTTGCTGCTGCAGTGTGACATGCAGA
(((((((((((((.((((.(.&).)))).))))))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282397
GeneSymbolHPCAL4
Binding site464,491
Score0.923
Seed1
Au0.441
Energy-19.2
Binding len27
Me-4.794
Phylopstem1.0748503684210524
Phylopflank1.1434503212499996
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure