Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAATGAGGGCCAACTTCTGAAGTTTCTACCAGCTGCAGTTGCT
..(((((((((((((..(((.&.)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282408
GeneSymbolIL1RL1
Binding site50,96
Score1.0
Seed1
Au0.559
Energy-23.8
Binding len20
Me-5.19
Phylopstem-0.11841049384615379
Phylopflank-0.04667154187500002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure