Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTCCAACATGTTGGCCAGGC
.((((((..((.((((......&.))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330698
GeneSymbolYTHDC1
Binding site4669,4692
Score0.897
Seed1
Au0.515
Energy-17.4
Binding len16
Me-10.51
Phylopstem4.343666333333333
Phylopflank5.413462262499998
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end2
Position3UTR
2D Structure