Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTGGAGTGCGGGAAGAGCTTCAGCCGCAGCTGCAAT
(((((((((((((((.(((.(&.).)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282415
GeneSymbolZSCAN10
Binding site1885,1923
Score1.0
Seed1
Au0.353
Energy-31.4
Binding len22
Me-4.171
Phylopstem-0.022703726666666726
Phylopflank0.21627991250000003
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure