Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTTGCGGCCGCAGCTTCACGCAGA
(((((((((((((((((((.(&).)))))))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282416
GeneSymbolZSCAN10
Binding site1562,1588
Score0.846
Seed1
Au0.324
Energy-28.8
Binding len26
Me-3.938
Phylopstem-0.8297622826086958
Phylopflank-1.25738634875
Longest consecutive pairings15
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure