Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATCAACTTTTTTATTCAGTGTTCAGGCTGTAAA
((((((((..(((((((((((&)))))).))))).................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282418
GeneSymbolSTAG2
Binding site638,676
Score0.846
Seed1
Au0.632
Energy-18.7
Binding len38
Me-6.236
Phylopstem5.901729916666667
Phylopflank5.682020331249999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure